R: Get the states at nodes or tips from a mapped tree

getStates {phytools}

R Documentation

Get the states at nodes or tips from a mapped tree

This function gets the states from the nodes or tips of a mapped tree (e.g., make.simmap).

getStates(tree, type=c("nodes","tips"))

`tree`	is a modified object of class `"phylo"` or `"multiPhylo"`.
`type`	mode indicating whether to get states at the nodes (`type="nodes"`) or the tips (`type="tips"`) of the tree.

A named vector (for "phylo") or matrix (for "multiPhylo").

Revell, L. J. (2012) phytools: An R package for phylogenetic comparative biology (and other things). Methods Ecol. Evol., 3, 217-223.