export.as.xml {phytools} | R Documentation |
This function exports trees & character data in XML format.
export.as.xml(file, trees, X)
file |
filename for export. |
trees |
a phylogenetic tree or trees in |
X |
a matrix of class |
Can be used to create input file for the program SIMMAP v1.5 (Bollback 2006), also see: http://www.simmap.com.
A file.
Liam Revell liam.revell@umb.edu
Bollback, J. P. (2006) Stochastic character mapping of discrete traits on phylogenies. BMC Bioinformatics, 7, 88.
Revell, L. J. (2012) phytools: An R package for phylogenetic comparative biology (and other things). Methods Ecol. Evol., 3, 217-223.
make.simmap
, read.nexus
, read.simmap
, write.simmap